Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI99579.1 | SFJ81145.1 | SAMN05421852_103172 | SAMN05421852_1242 | Site-specific DNA recombinase. | Helix-turn-helix domain of resolvase. | 0.465 |
SFI99579.1 | SFJ81364.1 | SAMN05421852_103172 | SAMN05421852_12411 | Site-specific DNA recombinase. | Tn3 transposase DDE domain-containing protein. | 0.487 |
SFI99579.1 | SFJ81386.1 | SAMN05421852_103172 | SAMN05421852_12412 | Site-specific DNA recombinase. | Tn3 transposase DDE domain-containing protein. | 0.433 |
SFJ18997.1 | SFJ78941.1 | SAMN05421852_105172 | SAMN05421852_12239 | Protein of unknown function. | Hypothetical protein. | 0.588 |
SFJ18997.1 | SFJ81145.1 | SAMN05421852_105172 | SAMN05421852_1242 | Protein of unknown function. | Helix-turn-helix domain of resolvase. | 0.476 |
SFJ18997.1 | SFJ81288.1 | SAMN05421852_105172 | SAMN05421852_1248 | Protein of unknown function. | Transposase and inactivated derivatives, TnpA family. | 0.764 |
SFJ18997.1 | SFJ81364.1 | SAMN05421852_105172 | SAMN05421852_12411 | Protein of unknown function. | Tn3 transposase DDE domain-containing protein. | 0.773 |
SFJ18997.1 | SFJ81386.1 | SAMN05421852_105172 | SAMN05421852_12412 | Protein of unknown function. | Tn3 transposase DDE domain-containing protein. | 0.777 |
SFJ18997.1 | SFJ81416.1 | SAMN05421852_105172 | SAMN05421852_12413 | Protein of unknown function. | Tn3 transposase DDE domain-containing protein. | 0.774 |
SFJ78941.1 | SFJ18997.1 | SAMN05421852_12239 | SAMN05421852_105172 | Hypothetical protein. | Protein of unknown function. | 0.588 |
SFJ78941.1 | SFJ81364.1 | SAMN05421852_12239 | SAMN05421852_12411 | Hypothetical protein. | Tn3 transposase DDE domain-containing protein. | 0.504 |
SFJ78941.1 | SFJ81386.1 | SAMN05421852_12239 | SAMN05421852_12412 | Hypothetical protein. | Tn3 transposase DDE domain-containing protein. | 0.477 |
SFJ78941.1 | SFJ81416.1 | SAMN05421852_12239 | SAMN05421852_12413 | Hypothetical protein. | Tn3 transposase DDE domain-containing protein. | 0.439 |
SFJ78941.1 | SFJ81436.1 | SAMN05421852_12239 | SAMN05421852_12414 | Hypothetical protein. | Protein of unknown function. | 0.542 |
SFJ81145.1 | SFI99579.1 | SAMN05421852_1242 | SAMN05421852_103172 | Helix-turn-helix domain of resolvase. | Site-specific DNA recombinase. | 0.465 |
SFJ81145.1 | SFJ18997.1 | SAMN05421852_1242 | SAMN05421852_105172 | Helix-turn-helix domain of resolvase. | Protein of unknown function. | 0.476 |
SFJ81145.1 | SFJ81288.1 | SAMN05421852_1242 | SAMN05421852_1248 | Helix-turn-helix domain of resolvase. | Transposase and inactivated derivatives, TnpA family. | 0.757 |
SFJ81145.1 | SFJ81364.1 | SAMN05421852_1242 | SAMN05421852_12411 | Helix-turn-helix domain of resolvase. | Tn3 transposase DDE domain-containing protein. | 0.673 |
SFJ81145.1 | SFJ81386.1 | SAMN05421852_1242 | SAMN05421852_12412 | Helix-turn-helix domain of resolvase. | Tn3 transposase DDE domain-containing protein. | 0.740 |
SFJ81145.1 | SFJ81416.1 | SAMN05421852_1242 | SAMN05421852_12413 | Helix-turn-helix domain of resolvase. | Tn3 transposase DDE domain-containing protein. | 0.677 |
page 1 of 4