STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ83021.1Helix-turn-helix of insertion element transposase. (121 aa)    
Predicted Functional Partners:
SFJ83053.1
Phage terminase large subunit.
       0.787
SFJ83071.1
Phage portal protein, SPP1 family.
       0.751
SFJ83094.1
Phage putative head morphogenesis protein, SPP1 gp7 family.
       0.746
SFJ83117.1
Hypothetical protein.
       0.746
SFJ83132.1
Protein of unknown function.
       0.592
SFJ83153.1
Hypothetical protein.
       0.563
SFJ82998.1
Hypothetical protein.
       0.440
SFJ82976.1
Hypothetical protein.
       0.414
Your Current Organism:
Thermoflavimicrobium dichotomicum
NCBI taxonomy Id: 46223
Other names: ATCC 49854, Actinobifida dichotomica, DSM 44778, JCM 9688, KCTC 3667, T. dichotomicum, Thermoactinomyces dichotomica, Thermoactinomyces dichotomicus, Thermomonospora citrina, strain 114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.