STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ96958.1Fengycin family lipopeptide synthetase D. (378 aa)    
Predicted Functional Partners:
SFJ91317.1
Surfactin family lipopeptide synthetase A.
 0.998
SFJ94176.1
Surfactin family lipopeptide synthetase A.
 0.998
SFJ95149.1
Surfactin family lipopeptide synthetase A/fengycin family lipopeptide synthetase D.
 0.998
SFJ97465.1
Lichenysin synthetase A.
 0.998
SFJ96200.1
Polyketide synthase PksM/polyketide synthase PksN.
 0.994
SFJ59664.1
Polyketide synthase PksJ.
 
0.988
SFJ95744.1
Polyketide synthase PksN.
 0.984
SFJ92545.1
Polyketide synthase PksM.
 0.981
SFJ91392.1
AMP-binding enzyme.
 
     0.976
SFJ97043.1
AMP-binding enzyme.
 
     0.976
Your Current Organism:
Thermoflavimicrobium dichotomicum
NCBI taxonomy Id: 46223
Other names: ATCC 49854, Actinobifida dichotomica, DSM 44778, JCM 9688, KCTC 3667, T. dichotomicum, Thermoactinomyces dichotomica, Thermoactinomyces dichotomicus, Thermomonospora citrina, strain 114
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.