STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ97369.1Fengycin family lipopeptide synthetase D. (350 aa)    
Predicted Functional Partners:
SFJ59664.1
Polyketide synthase PksJ.
 
0.999
SFJ64560.1
Surfactin synthase thioesterase subunit.
 
 0.999
SFJ64582.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
 
 
0.999
SFJ64597.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
 
0.999
SFJ64628.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
 
 
0.999
SFJ64648.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
 
0.999
SFJ70093.1
Polyketide synthase PksJ/polyketide synthase PksN.
 0.999
SFJ89272.1
Polyketide synthase PksN.
 0.999
SFJ91317.1
Surfactin family lipopeptide synthetase A.
 0.999
SFJ91368.1
Surfactin family lipopeptide synthetase A.
 
 
0.999
Your Current Organism:
Thermoflavimicrobium dichotomicum
NCBI taxonomy Id: 46223
Other names: ATCC 49854, Actinobifida dichotomica, DSM 44778, JCM 9688, KCTC 3667, T. dichotomicum, Thermoactinomyces dichotomica, Thermoactinomyces dichotomicus, Thermomonospora citrina, strain 114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.