Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
B4102_0804FIG012187: hypothetical protein. (61 aa)    
Predicted Functional Partners:
B4102_4171
FIG01225551: hypothetical protein.
  
     0.762
B4102_4204
Hypothetical protein.
  
     0.756
B4102_2543
Hypothetical protein.
  
     0.749
B4102_0824
Hypothetical protein.
  
     0.735
B4102_0805
Integral membrane protein, TerC family.
       0.693
B4102_2774
Hypothetical protein; Nitric oxide reductase activation protein NorD.
  
     0.660
B4102_0404
FIG01108140: hypothetical protein.
  
     0.659
B4102_0806
ABC transporter, ATP-binding protein.
       0.656
B4102_0807
ABC transporter, permease protein (putative).
       0.656
B4102_0348
FIG01226255: hypothetical protein.
  
     0.640
Your Current Organism:
Bacillus sporothermodurans
NCBI taxonomy Id: 46224
Other names: B. sporothermodurans, CIP 104910, DSM 10599, LMG 17668, LMG 17894, LMG:17668, LMG:17894, strain M215, strain MB 581
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