Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
B4102_1069FIG007697: hypothetical protein. (79 aa)    
Predicted Functional Partners:
B4102_1210
FIGfam003972: membrane protein.
  
     0.740
B4102_1067
Hypothetical protein; FIG007013: polysaccharide deacetylase, putative.
 
   
 0.738
B4102_1244
FIG011856: hypothetical protein.
  
   
 0.725
B4102_1595
FIG01227197: hypothetical protein.
  
   
 0.703
B4102_1070
Dipicolinate synthase subunit A.
       0.678
B4102_1071
Hypothetical protein; Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA).
       0.678
B4102_1372
Stage III sporulation protein AD.
  
     0.677
B4102_1373
Stage III sporulation protein AE.
  
     0.675
B4102_1068
Hypothetical protein; FIG007959: peptidase, M16 family; Belongs to the peptidase M16 family.
  
    0.649
B4102_1499
FIG01225215: hypothetical protein.
  
     0.633
Your Current Organism:
Bacillus sporothermodurans
NCBI taxonomy Id: 46224
Other names: B. sporothermodurans, CIP 104910, DSM 10599, LMG 17668, LMG 17894, LMG:17668, LMG:17894, strain M215, strain MB 581
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