Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
B4102_2002Hypothetical protein. (408 aa)    
Predicted Functional Partners:
B4102_2003
Hypothetical protein.
 
     0.956
B4102_4172
Hypothetical protein.
 
 
 0.915
B4102_0506
Hypothetical protein; RND multidrug efflux transporter; Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.911
B4102_3498
Hypothetical protein; Probable ABC transporter.
  
 
 0.885
B4102_3160
ABC transporter permease protein YvcS.
  
 
 0.868
B4102_3222
Hypothetical protein; Heme efflux system ATPase HrtA.
  
 
 0.740
B4102_0980
Choloylglycine hydrolase.
  
     0.686
B4102_1436
Hypothetical protein.
  
     0.650
B4102_2000
Hypothetical protein; YwqB.
 
     0.640
B4102_0543
Bacitracin export ATP-binding protein BceA.
  
 
 0.597
Your Current Organism:
Bacillus sporothermodurans
NCBI taxonomy Id: 46224
Other names: B. sporothermodurans, CIP 104910, DSM 10599, LMG 17668, LMG 17894, LMG:17668, LMG:17894, strain M215, strain MB 581
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