Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
B4102_2011Hypothetical protein. (257 aa)    
Predicted Functional Partners:
B4102_2010
ABC transporter ATP-binding protein.
 
     0.961
B4102_3024
Hypothetical protein; Acetyltransferase, GNAT family.
  
     0.637
B4102_2009
Hypothetical protein.
       0.490
B4102_3502
Hypothetical protein; Intein homing endonuclease-related protein.
  
     0.485
atpC
ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.482
B4102_0260
ABC transporter, permease protein.
   
   0.473
B4102_1702
Putative membrane protein.
   
   0.473
B4102_3504
Hypothetical protein.
  
     0.473
B4102_3736
Hypothetical protein.
   
   0.473
atpD
ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.470
Your Current Organism:
Bacillus sporothermodurans
NCBI taxonomy Id: 46224
Other names: B. sporothermodurans, CIP 104910, DSM 10599, LMG 17668, LMG 17894, LMG:17668, LMG:17894, strain M215, strain MB 581
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