STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4102_2071Hypothetical protein. (119 aa)    
Predicted Functional Partners:
B4102_3838
General stress protein.
  
    0.830
rsbW
Serine-protein kinase rsbW; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).
 
  
 0.760
B4102_0784
Hypothetical protein; UspA.
  
    0.741
B4102_2990
Hypothetical protein; YbyB.
  
    0.720
B4102_1876
Conserved hypothetical protein; putative phospholipase D endonuclease domain.
 
    0.707
B4102_3380
ThiJ/PfpI family protein.
   
  
 0.692
B4102_0664
Transglycosylase-associated protein.
 
  
 0.608
B4102_1400
Magnesium and cobalt transport protein CorA.
  
    0.594
B4102_4274
Hypothetical protein; RsbR, positive regulator of sigma-B.
 
    0.559
B4102_0387
YMAD protein.
  
    0.545
Your Current Organism:
Bacillus sporothermodurans
NCBI taxonomy Id: 46224
Other names: B. sporothermodurans, CIP 104910, DSM 10599, LMG 17668, LMG 17894, LMG:17668, LMG:17894, strain M215, strain MB 581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.