STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4102_2829Hypothetical protein; YpmR. (257 aa)    
Predicted Functional Partners:
B4102_2828
Hypothetical protein; YfaA.
 
  
 0.960
B4102_3581
Hypothetical protein; Putative major teichoic acid biosynthesis protein C.
  
   0.743
B4102_2823
Hypothetical protein; Belongs to the UPF0346 family.
 
  
 0.658
B4102_2830
Inosine-uridine preferring nucleoside hydrolase.
       0.597
B4102_2649
Hypothetical protein; Negative regulation of sigma-X activity.
   
  0.587
B4102_3266
DnaD domain protein.
   
  0.587
B4102_3408
Hypothetical protein.
   
  0.587
B4102_3516
Hypothetical protein.
   
  0.587
B4102_3890
Lmo0066 -like protein within ESAT-6 gene cluster, similarity to ADP-ribosylating toxins.
   
  0.587
B4102_3937
Hypothetical protein; Putative toxin component near putative ESAT-related proteins, repetitive / Repetitive hypothetical protein near ESAT cluster, SA0282 -like protein.
   
  0.587
Your Current Organism:
Bacillus sporothermodurans
NCBI taxonomy Id: 46224
Other names: B. sporothermodurans, CIP 104910, DSM 10599, LMG 17668, LMG 17894, LMG:17668, LMG:17894, strain M215, strain MB 581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.