STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4102_3045ABC transporter, ATP-binding protein. (319 aa)    
Predicted Functional Partners:
B4102_3046
Hypothetical protein; L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation.
  
 0.998
B4102_1193
Hypothetical protein; Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB.
  
  0.925
B4102_1194
Hypothetical protein; Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC.
 
  
  0.924
B4102_1195
Hypothetical protein; Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD.
  
  0.915
B4102_2113
Hypothetical protein; Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1).
 
 0.731
B4102_2430
Hypothetical protein; Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1).
 
 0.731
B4102_3086
Hypothetical protein; Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1).
  
 0.731
B4102_1192
Hypothetical protein; Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA.
  
  
 
0.666
B4102_3085
Hypothetical protein; Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1).
 
 0.644
B4102_2429
Hypothetical protein; Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1).
 
 0.642
Your Current Organism:
Bacillus sporothermodurans
NCBI taxonomy Id: 46224
Other names: B. sporothermodurans, CIP 104910, DSM 10599, LMG 17668, LMG 17894, LMG:17668, LMG:17894, strain M215, strain MB 581
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