Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFW94137.1 | AFW95041.1 | ANA_C11358 | ANA_C12306 | Iron-sulfur cluster-binding protein. | Homoserine dehydrogenase. | 0.900 |
AFW94137.1 | AFW97169.1 | ANA_C11358 | ANA_C20754 | Iron-sulfur cluster-binding protein. | Hypothetical protein. | 0.979 |
AFW94137.1 | asd | ANA_C11358 | ANA_C10087 | Iron-sulfur cluster-binding protein. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.911 |
AFW95041.1 | AFW94137.1 | ANA_C12306 | ANA_C11358 | Homoserine dehydrogenase. | Iron-sulfur cluster-binding protein. | 0.900 |
AFW95041.1 | AFW97169.1 | ANA_C12306 | ANA_C20754 | Homoserine dehydrogenase. | Hypothetical protein. | 0.900 |
AFW95041.1 | asd | ANA_C12306 | ANA_C10087 | Homoserine dehydrogenase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.969 |
AFW95041.1 | dapA | ANA_C12306 | ANA_C10085 | Homoserine dehydrogenase. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.956 |
AFW95041.1 | dapB | ANA_C12306 | ANA_C11105 | Homoserine dehydrogenase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.662 |
AFW95041.1 | dapF | ANA_C12306 | ANA_C11652 | Homoserine dehydrogenase. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.431 |
AFW95041.1 | gltS | ANA_C12306 | ANA_C10135 | Homoserine dehydrogenase. | Glutamate synthase. | 0.621 |
AFW95041.1 | lysA-2 | ANA_C12306 | ANA_C20373 | Homoserine dehydrogenase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.510 |
AFW95041.1 | lysC | ANA_C12306 | ANA_C11753 | Homoserine dehydrogenase. | Aspartate kinase. | 0.907 |
AFW95041.1 | thrB | ANA_C12306 | ANA_C11136 | Homoserine dehydrogenase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.991 |
AFW97169.1 | AFW94137.1 | ANA_C20754 | ANA_C11358 | Hypothetical protein. | Iron-sulfur cluster-binding protein. | 0.979 |
AFW97169.1 | AFW95041.1 | ANA_C20754 | ANA_C12306 | Hypothetical protein. | Homoserine dehydrogenase. | 0.900 |
AFW97169.1 | asd | ANA_C20754 | ANA_C10087 | Hypothetical protein. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.910 |
asd | AFW94137.1 | ANA_C10087 | ANA_C11358 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Iron-sulfur cluster-binding protein. | 0.911 |
asd | AFW95041.1 | ANA_C10087 | ANA_C12306 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Homoserine dehydrogenase. | 0.969 |
asd | AFW97169.1 | ANA_C10087 | ANA_C20754 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Hypothetical protein. | 0.910 |
asd | dapA | ANA_C10087 | ANA_C10085 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.976 |
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