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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW92963.1Glycosyl hydrolase family-13 protein. (487 aa)    
Predicted Functional Partners:
malQ
4-alpha-glucanotransferase.
 
 0.993
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.959
AFW93028.1
Alpha-glucan phosphorylase.
 
 0.947
AFW95871.1
Glycoside hydrolase family 57 protein; Belongs to the glycosyl hydrolase 57 family.
     
 0.916
AFW92962.1
HAD family hydrolase.
       0.775
glgA
Glycogen/starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  
 0.726
AFW94700.1
Beta-phosphoglucomutase.
 
  
 0.716
AFW92964.1
Procollagen-lysine 5-dioxygenase.
       0.639
AFW95737.1
Alpha amylase catalytic domain-containing protein.
 
  
0.624
AFW96968.1
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.620
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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