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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW92966.1HAD-superfamily hydrolase. (245 aa)    
Predicted Functional Partners:
susA
Sucrose synthase.
 
  
 0.992
AFW95585.1
Sucrose-phosphate synthase.
  
  
 
0.923
AFW95645.1
Sucrose phosphatase.
  
  
 
0.908
AFW92965.1
Hypothetical protein.
       0.773
AFW92953.1
Haloacid dehalogenase family protein.
  
     0.756
AFW93512.1
Glycosyl transferase.
 
   
 0.724
rsgA
Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
   
 0.613
AFW92962.1
HAD family hydrolase.
 
    
0.534
AFW95054.1
Neutral invertase.
 
     0.504
dndD
DNA sulfur modification protein DndD.
      
 0.470
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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