Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AFW93039.1WD-40 repeat-containing protein. (1176 aa)    
Predicted Functional Partners:
AFW94759.1
SNF2 family helicase-like protein.
    
 0.832
AFW93040.1
Diguanylate cyclase.
 
    
0.758
AFW93037.1
Hypothetical protein.
       0.623
AFW93038.1
ABC transporter family protein.
       0.623
AFW95809.1
Beta-lactamase domain-containing protein.
  
 
  0.527
AFW93705.1
Histone deacetylase-like protein.
    
  0.507
alaS-2
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
    
  0.468
AFW94779.1
WD-40 repeat-containing protein.
  
 
 
0.461
AFW95663.1
Ribosome biogenesis GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
  0.458
AFW93940.1
TPR repeat-containing protein.
  
 
  0.457
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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