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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW93039.1WD-40 repeat-containing protein. (1176 aa)    
Predicted Functional Partners:
AFW93040.1
Diguanylate cyclase.
 
    
0.759
AFW93037.1
Hypothetical protein.
       0.623
AFW93038.1
ABC transporter family protein.
       0.623
AFW94759.1
SNF2 family helicase-like protein.
    
 0.612
AFW95809.1
Beta-lactamase domain-containing protein.
  
 
  0.547
alaS-2
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
  0.461
AFW95797.1
Serine protease S1/GUN4 domain-containing protein.
  
  0.454
AFW94541.1
Hypothetical protein.
  
     0.445
AFW95252.1
TPR repeat-containing serine and cysteine peptidase.
  
  0.444
AFW94269.1
Trypsin domain-containing protein.
  
  0.436
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.