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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW93112.1TPR domain-containing protein. (681 aa)    
Predicted Functional Partners:
AFW94326.1
Serine/threonine protein kinase.
  
 0.868
AFW96407.1
Ankyrin repeat-containing protein.
 
 0.865
alaS-2
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.836
AFW95614.1
Glycerol kinase; Incomplete N terminus.
   
 0.831
AFW92876.1
TRP repeat-containing protein.
 0.800
AFW96716.1
TPR repeat-containing protein.
 
 0.791
AFW94779.1
WD-40 repeat-containing protein.
  
 0.773
AFW93612.1
mov34/MPN/PAD-1 family protein.
  
 0.752
AFW96362.1
Hypothetical protein.
  
 
 0.738
AFW94457.1
Hypothetical protein.
  
 
 0.703
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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