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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW93122.1Alcohol dehydrogenase. (340 aa)    
Predicted Functional Partners:
AFW95784.1
pfkB family carbohydrate kinase.
 
 
 0.922
AFW95197.1
Zinc-containing alcohol dehydrogenase.
  
  
 
0.918
psbA2
Photosystem II protein D1/PsbA.
      
 0.601
AFW92893.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.572
AFW94510.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.572
tynA
Amine oxidase.
     
 0.503
bioF
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
  
  
 0.469
mcyG
Peptide synthetase polyketide synthase fusion protein McyG.
  
  
 0.468
nifJ
Pyruvate-flavodoxin oxidoreductase NifJ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
     
 0.466
nifJ-2
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
     
 0.466
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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