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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW93231.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
AFW93230.1
HTH domain-containing protein.
 
 
 0.965
AFW94988.1
Hypothetical protein.
 
 
 0.863
AFW95916.1
HTH transcriptional regulator.
 
 
 0.851
AFW93232.1
Hypothetical protein.
       0.773
AFW93233.1
Hypothetical protein.
       0.773
AFW96170.1
Hypothetical protein.
 
 
 0.630
AFW95537.1
Hypothetical protein.
 
 
 0.593
AFW93234.1
Hypothetical protein.
       0.509
AFW94593.1
Hypothetical protein.
  
  
 
0.437
AFW94989.1
Hypothetical protein.
  
  
 
0.405
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.