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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW93259.1ABC-2 type tarsporter protein. (294 aa)    
Predicted Functional Partners:
AFW97076.1
ABC transporter.
 
  
 0.898
AFW93260.1
Hypothetical protein.
       0.728
AFW94899.1
Hypothetical protein.
  
  
 0.724
AFW93034.1
Putative nitroreductase.
  
  
 0.641
AFW94900.1
Nitroreductase.
  
  
 0.641
AFW97085.1
Nitroreductase.
  
  
 0.641
AFW94912.1
ABC transporter.
  
  
 0.639
AFW96053.1
ABC transporter ATP-binding protein.
  
  
 0.639
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.514
AFW93258.1
Hypothetical protein.
       0.490
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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