Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFW93259.1ABC-2 type tarsporter protein. (294 aa)    
Predicted Functional Partners:
AFW97076.1
ABC transporter.
 
 
 0.971
AFW94473.1
Glycine/betaine ABC transporter substrate-binding and permease protein.
    
  0.925
AFW93520.1
Metal ion ABC transporter permease protein.
 
  
  0.917
mntB
Manganese ABC transporter permease protein.
 
  
  0.913
AFW96647.1
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
     
 0.912
AFW93142.1
YjgP/YjgQ family permease.
     
 0.906
AFW96748.1
Polar amino acid ABC transporter inner membrane subunit.
     
 0.906
AFW93143.1
ABC transporter family protein.
    
  0.905
AFW95217.1
ABC-2 type transporter.
    
  0.902
AFW92999.1
Extracellular solute-binding family 5 protein.
     
 0.901
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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