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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW93322.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
AFW93323.1
Hypothetical protein.
 
     0.880
AFW93111.1
IS4 family transposase.
  
     0.666
AFW95826.1
IS4 family transposase.
  
     0.666
AFW93483.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.617
AFW95735.1
IS5 family IS5 ssgr transposase.
  
     0.558
AFW93482.1
Plasmid stabilization system protein.
  
     0.550
AFW93842.1
Hypothetical protein.
  
     0.525
AFW94187.1
Hypothetical protein.
  
     0.498
AFW93083.1
Hypothetical protein.
  
     0.495
AFW93931.1
Pentapeptide repeat-containing protein.
  
     0.456
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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