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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW93327.1TetR-like transcriptional regulator. (197 aa)    
Predicted Functional Partners:
AFW93326.1
ABC transporter membrane fusion protein DevB.
 
   
 0.788
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.558
devC
ABC transporter permease protein DevC.
     
 0.558
devA
ABC transporter ATP-binding protein DevA.
   
 
 0.531
AFW93328.1
Pseudouridylate synthase.
       0.505
AFW96586.1
Multi-sensor hybrid histidine kinase.
  
 
 
 0.490
AFW94293.1
Modular nonribosomal peptide synthetase.
   
 
 0.488
AFW93119.1
Hypothetical protein.
  
     0.472
mcyG
Peptide synthetase polyketide synthase fusion protein McyG.
     
 0.465
mcyD
Polyketide synthase type 1 McyD.
   
 
 0.443
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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