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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW93335.1N-acetylmuramoyl-L-alanine amidase. (174 aa)    
Predicted Functional Partners:
AFW96749.1
Glycoside hydrolase family 3 protein.
  
  
  0.556
AFW95329.1
Competence/damage-inducible protein CinA; Belongs to the CinA family.
 
     0.537
AFW95118.1
Peptidase M23B.
 
   
 0.534
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
   
 0.532
AFW94575.1
LD-carboxypeptidase.
     
 0.505
AFW93334.1
Hypothetical protein.
       0.479
AFW93920.1
Serine protease.
   
   0.407
AFW96067.1
Rhomboid family protein.
   
   0.407
AFW94901.1
Hypothetical protein.
 
      0.405
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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