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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW93384.1Hypothetical protein. (405 aa)    
Predicted Functional Partners:
AFW93033.1
OstA family protein.
  
     0.626
AFW93089.1
Hypothetical protein.
  
     0.606
AFW93385.1
Hypothetical protein.
       0.512
AFW93999.1
Hypothetical protein.
  
     0.497
AFW96845.1
50S ribosomal protein L25; Belongs to the bacterial ribosomal protein bL25 family.
  
     0.489
AFW95995.1
Hypothetical protein.
  
     0.472
AFW97046.1
Hypothetical protein.
  
     0.472
AFW94692.1
Hypothetical protein.
  
     0.464
apcE
Phycobilisome linker polypeptide ApcE; Belongs to the phycobilisome linker protein family.
  
     0.456
AFW93144.1
OstA family protein.
  
     0.437
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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