STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livMBranched-chain amino acid ABC-transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (377 aa)    
Predicted Functional Partners:
AFW96298.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
livG
Branched-chain amino acid ABC transporter ATP-binding protein.
 
 0.997
AFW95299.1
ABC transporter-like protein.
 
 0.994
AFW95677.1
Extracellular ligand-binding receptor.
 
 
 0.984
AFW95037.1
Extracellular ligand binding domain-containing protein.
 
  
 0.760
AFW96713.1
Extracellular ligand-binding receptor.
 
  
 0.743
AFW96576.1
TPR repeat and extracellular ligand-binding domain-containing protein.
 
  
 0.742
AFW96577.1
TPR repeat and extracellular ligand-binding domain-containing protein.
 
  
 0.713
AFW94010.1
Ligand binding domain-containing protein.
 
  
 0.673
AFW96290.1
Extracellular ligand-binding receptor.
  
  
 0.627
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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