Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFW93501.1Hypothetical protein. (77 aa)    
Predicted Functional Partners:
livG
Branched-chain amino acid ABC transporter ATP-binding protein.
       0.741
AFW93716.1
Hypothetical protein.
 
 
  0.689
AFW93502.1
GTP-binding protein.
       0.603
AFW93499.1
Putative restriction endonuclease.
       0.520
AFW95537.1
Hypothetical protein.
  
  
  0.475
AFW92825.1
Hypothetical protein.
  
 
  0.471
ycfA
YcfA family protein.
  
 
  0.433
livM
Branched-chain amino acid ABC-transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.415
AFW94792.1
Hypothetical protein.
  
  
  0.400
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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