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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW93566.1FAD dependent oxidoreductase. (387 aa)    
Predicted Functional Partners:
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.752
AFW93093.1
Hypothetical protein.
  
     0.713
AFW93870.1
Hypothetical protein.
 
     0.685
AFW93567.1
Hypothetical protein.
  
    0.630
AFW94016.1
Putative membrane protein.
  
     0.546
AFW93568.1
Hypothetical protein.
 
     0.536
AFW94128.1
Hypothetical protein.
  
     0.535
AFW94293.1
Modular nonribosomal peptide synthetase.
  
  
 0.518
mcyG
Peptide synthetase polyketide synthase fusion protein McyG.
  
  
 0.515
AFW92950.1
Hypothetical protein.
  
     0.508
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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