Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFW93735.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
AFW93734.1
Hypothetical protein.
 
     0.919
AFW93733.1
WD40 repeat-containing protein.
 
     0.660
AFW93732.1
Hypothetical protein.
       0.547
AFW96120.1
Hypothetical protein.
  
     0.514
AFW93842.1
Hypothetical protein.
  
     0.467
AFW94543.1
Arabinofuranosidase-like protein.
  
     0.452
AFW94441.1
NB-ARC domain-containing protein.
  
     0.450
AFW94766.1
Hypothetical protein.
  
     0.448
AFW93736.1
Hypothetical protein.
       0.427
gltS
Glutamate synthase.
       0.424
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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