Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFW93739.1Hypothetical protein. (308 aa)    
Predicted Functional Partners:
AFW96662.1
Hypothetical protein.
  
     0.625
AFW95620.1
Putative restriction endonuclease, C terminal.
  
     0.558
AFW94958.1
Putative restriction endonuclease.
  
     0.541
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.538
AFW93737.1
Hypothetical protein.
       0.495
AFW96487.1
Hypothetical protein.
  
     0.493
AFW96359.1
Putative restriction endonuclease.
  
     0.459
AFW94012.1
Putative restriction endonuclease.
  
     0.448
AFW94061.1
Putative restriction endonuclease.
  
     0.443
AFW95116.1
Methyltransferase type 11.
  
    0.440
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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