Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFW93749.1TPR repeat-containing proptein. (972 aa)    
Predicted Functional Partners:
AFW93347.1
TPR repeat-containing protein.
 
  
0.926
AFW94457.1
Hypothetical protein.
  
 
 0.921
AFW96586.1
Multi-sensor hybrid histidine kinase.
  
 
 0.916
AFW95181.1
CheB methylesterase.
  
 
 0.911
cheW
CheW protein.
  
 0.910
AFW96295.1
CheW protein.
  
 0.910
AFW93112.1
TPR domain-containing protein.
 
0.909
cheD
Methyl-accepting chemotaxis receptor with phytochrome sensor.
  
 0.894
AFW94698.1
Histidine-containing phosphotransfer domain containing-protein.
  
 
 0.881
AFW94440.1
Hypothetical protein.
 
  
  0.878
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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