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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW93749.1TPR repeat-containing proptein. (972 aa)    
Predicted Functional Partners:
AFW94457.1
Hypothetical protein.
  
 
 0.959
AFW95181.1
CheB methylesterase.
  
 
 0.935
AFW96586.1
Multi-sensor hybrid histidine kinase.
  
 
 0.922
cheW
CheW protein.
  
 
 0.879
AFW96295.1
CheW protein.
  
 
 0.879
AFW94698.1
Histidine-containing phosphotransfer domain containing-protein.
  
 
 0.845
AFW95834.1
Two-component AraC family transcriptional regulator.
 
 
 0.831
AFW94744.1
Signal transduction sensor and regulator protein.
  
 
 0.802
cheD
Methyl-accepting chemotaxis receptor with phytochrome sensor.
  
 
 0.800
AFW93140.1
Two-component response regulator.
 
 
 0.793
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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