Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFW93818.1GUN4 domain-containing protein. (570 aa)    
Predicted Functional Partners:
aptF
ABC transporter ATP-binding protein AptF.
 
     0.888
AFW96709.1
IS607 family transposase.
  
     0.751
AFW94566.1
Patatin-like protein.
  
     0.721
mcyF
Asp/Glu racemase McyF.
  
     0.672
adpC
Putative halogenase ApdC.
  
     0.651
mcyD
Polyketide synthase type 1 McyD.
  
     0.648
mcyE
Polyketide synthase peptide synthetase fusion protein McyE.
  
     0.645
AFW96248.1
ATPase.
  
     0.625
AFW94405.1
Hypothetical protein.
  
     0.624
AFW93594.1
Hypothetical protein.
  
     0.613
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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