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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpcG3Phycobilisome rod-core linker protein 3; Belongs to the phycobilisome linker protein family. (242 aa)    
Predicted Functional Partners:
cpcA
Phycocyanin alpha subunit.
  
 
 0.997
cpcB
Phycocyanin beta subunit.
  
 
 0.996
cpcD
Rod-capping linker protein.
 
 
 0.996
cpcE
Phycocyanobilin lyase alpha subunit.
  
  
 0.987
cpcC
Phycobilisome rod linker protein; Belongs to the phycobilisome linker protein family.
  
 
0.986
cpcF
Phycocyanobilin lyase beta subunit.
 
  
 0.986
cpcG2
Phycobilisome rod-core linker protein 2; Belongs to the phycobilisome linker protein family.
 
 
0.974
apcC
Allophycocyanin linker protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
 0.973
apcB
Allophycocyanin beta subunit.
  
 
 
 0.968
apcF
Allophycocyanin subunit beta.
  
 
 
 0.962
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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