STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW93874.1Penicillin-binding protein. (791 aa)    
Predicted Functional Partners:
AFW96925.1
Penicillin-binding protein 1C.
  
  
 
0.924
AFW96678.1
1A family penicillin-binding protein.
  
  
 
0.913
AFW96537.1
Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin.
     
 0.904
AFW93785.1
Hypothetical protein.
   
 
 0.763
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.703
AFW96374.1
Hypothetical protein.
    
 
 0.667
AFW95118.1
Peptidase M23B.
 
  
 0.647
AFW96328.1
Peptidase M23B.
  
     0.631
AFW96553.1
Peptidase M23B.
  
     0.630
AFW93297.1
Cell cycle protein; Belongs to the SEDS family.
  
 
 
 0.624
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.