Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AFW93940.1TPR repeat-containing protein. (337 aa)    
Predicted Functional Partners:
AFW94441.1
NB-ARC domain-containing protein.
 
  
  0.906
AFW94439.1
Tetratricopeptide repeat-containing protein.
  
 
0.894
AFW93347.1
TPR repeat-containing protein.
    
  0.874
AFW94440.1
Hypothetical protein.
 
  
  0.865
AFW93112.1
TPR domain-containing protein.
 
 0.823
AFW96127.1
TPR repeat-containing serine/threonine protein kinase.
  
  0.785
AFW95790.1
TPR repeat-containing protein.
 
  0.735
AFW94331.1
Tetratricopeptide repeat-containing protein.
 
  
  0.714
AFW93965.1
TPR repeat-containing protein.
 
  0.707
AFW95651.1
TPR repeat-containing protein.
  
  
 
0.705
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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