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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW93940.1TPR repeat-containing protein. (337 aa)    
Predicted Functional Partners:
AFW93941.1
Hypothetical protein.
   
   0.538
mcyG
Peptide synthetase polyketide synthase fusion protein McyG.
 
 
 0.495
AFW94546.1
WD-40 repeat-containing protein.
 
  0.492
AFW93911.1
WD-40 repeat-containing protein.
 
 
  0.487
AFW95083.1
Heat shock protein 90.
   
 0.476
AFW96586.1
Multi-sensor hybrid histidine kinase.
  
 
 0.474
AFW93504.1
WD-40 repeat-containing protein.
 
 
  0.471
AFW96407.1
Ankyrin repeat-containing protein.
  
  0.468
AFW94779.1
WD-40 repeat-containing protein.
 
  0.467
AFW96118.1
WD40 repeat-containing protein.
  0.457
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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