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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW93988.1Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (241 aa)    
Predicted Functional Partners:
AFW95959.1
Thioester reductase.
 
    
 0.913
aptB
Nonribosomal peptide synthetase anabaenopeptin synthetase AptB.
 
      0.832
AFW94648.1
Putative short-chain dehydrogenase.
  
 
   0.767
AFW95873.1
O-methyltransferase family 3 protein.
 
      0.737
accA
acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
       0.527
mcyC
Nonribosomal peptide synthetase McyC; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.515
mcyG
Peptide synthetase polyketide synthase fusion protein McyG.
  
 
 0.496
AFW94293.1
Modular nonribosomal peptide synthetase.
 
  
 0.487
mcyD
Polyketide synthase type 1 McyD.
 
 
 0.478
mcyA
Nonribosomal peptide sythetase McyA.
  
  
 0.449
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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