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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hupWHydrogenase maturation protease. (157 aa)    
Predicted Functional Partners:
hupL
Uptake hydrogenase large subunit; Contains excision element.
 
 
 0.962
hupS
Uptake hydrogenase small subunit, HupS.
 
  
 0.955
AFW94219.1
Hypothetical protein.
 
     0.787
AFW94240.1
Hypothetical protein.
  
     0.773
hoxY
Hydrogenase subunit HoxY.
  
  
 0.748
hoxU
Hydrogenase subunit HoxU.
     
 0.490
hypC
Hydrogenase expression/formation protein HypC/HupF.
 
  
 0.486
hypB
Hydrogenase accessory protein HypB.
 
   
 0.470
AFW94196.1
Protein methyltransferase.
       0.454
hypD
Hydrogenase expression/formation protein HypD.
 
   
 0.446
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.