Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFW94286.1Tetratricopeptide repeat-containing protein. (247 aa)    
Predicted Functional Partners:
AFW92876.1
TRP repeat-containing protein.
  
     0.770
AFW96716.1
TPR repeat-containing protein.
  
     0.732
AFW94759.1
SNF2 family helicase-like protein.
   
  0.683
AFW93112.1
TPR domain-containing protein.
 
0.660
AFW94817.1
TPR repeat-containing protein.
  
  
  0.613
AFW94284.1
Hypothetical protein.
  
    0.547
AFW94285.1
RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.545
AFW93347.1
TPR repeat-containing protein.
  
  
 
0.509
AFW95911.1
TPR repeat-containing protein.
 
    
0.475
AFW93965.1
TPR repeat-containing protein.
  
 
0.473
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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