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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW94326.1Serine/threonine protein kinase. (469 aa)    
Predicted Functional Partners:
mcyG
Peptide synthetase polyketide synthase fusion protein McyG.
  
 0.989
hoxF
Hydrogenase subunit HoxF.
   
 
 0.959
mcyD
Polyketide synthase type 1 McyD.
  
 0.939
AFW94779.1
WD-40 repeat-containing protein.
  
 0.916
AFW94065.1
Serine/threonine protein phosphatase.
 
 0.869
AFW93112.1
TPR domain-containing protein.
  
 0.868
AFW95790.1
TPR repeat-containing protein.
  
 0.861
AFW96859.1
Protein phosphatase 2C.
 
 
 0.859
AFW94490.1
Serine/threonine protein phosphatase.
 
 
 0.844
AFW92904.1
Glucose-methanol-choline oxidoreductase.
    
 0.841
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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