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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW94328.1Carotenoid oxygenase. (459 aa)    
Predicted Functional Partners:
AFW92893.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.725
AFW94510.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.725
AFW95662.1
Aldehyde dehydrogenase.
      
 0.722
AFW93641.1
Membrane protein.
      
 0.714
AFW95040.1
ferredoxin-NADP+ reductase.
      
 0.607
AFW96574.1
Pheophorbide a oxygenase.
  
     0.497
AFW95825.1
Hypothetical protein.
  
     0.472
AFW95841.1
phytanoyl-CoA dioxygenase.
  
   
 0.472
AFW93912.1
Hypothetical protein.
  
     0.441
AFW93910.1
Hypothetical protein.
  
     0.427
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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