AFW94339.1 protein (Anabaena sp. 90) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AFW94339.1

Copper-binding protein. (149 aa)

Predicted Functional Partners:

AFW95418.1

0.776

AFW94340.1

0.610

AFW96715.1

0.602

pilM

0.580

AFW96394.1

0.490

AFW95406.1

0.470

psbQ

0.470

map-2

0.466

AFW97013.1

0.438

AFW96224.1

0.435

Your Current Organism:

Anabaena sp. 90

NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFW94339.1	AFW94340.1	ANA_C11565	ANA_C11566	Copper-binding protein.	Peptidase M16.	0.610
AFW94339.1	AFW95406.1	ANA_C11565	ANA_C12694	Copper-binding protein.	Hypothetical protein.	0.470
AFW94339.1	AFW95418.1	ANA_C11565	ANA_C12707	Copper-binding protein.	Multicopper oxidase, types 2 and 3.	0.776
AFW94339.1	AFW96224.1	ANA_C11565	ANA_C13562	Copper-binding protein.	HlyD family secretion protein.	0.435
AFW94339.1	AFW96394.1	ANA_C11565	ANA_C13741	Copper-binding protein.	Hypothetical protein.	0.490
AFW94339.1	AFW96715.1	ANA_C11565	ANA_C20264	Copper-binding protein.	Hypothetical protein.	0.602
AFW94339.1	AFW97013.1	ANA_C11565	ANA_C20582	Copper-binding protein.	Hypothetical protein.	0.438
AFW94339.1	map-2	ANA_C11565	ANA_C11564	Copper-binding protein.	Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	0.466
AFW94339.1	pilM	ANA_C11565	ANA_C11575	Copper-binding protein.	Type IV pilus assembly protein PilM.	0.580
AFW94339.1	psbQ	ANA_C11565	ANA_C20008	Copper-binding protein.	Photosystem II protein PsbQ.	0.470
AFW94340.1	AFW94339.1	ANA_C11566	ANA_C11565	Peptidase M16.	Copper-binding protein.	0.610
AFW95406.1	AFW94339.1	ANA_C12694	ANA_C11565	Hypothetical protein.	Copper-binding protein.	0.470
AFW95418.1	AFW94339.1	ANA_C12707	ANA_C11565	Multicopper oxidase, types 2 and 3.	Copper-binding protein.	0.776
AFW96224.1	AFW94339.1	ANA_C13562	ANA_C11565	HlyD family secretion protein.	Copper-binding protein.	0.435
AFW96224.1	AFW96715.1	ANA_C13562	ANA_C20264	HlyD family secretion protein.	Hypothetical protein.	0.408
AFW96394.1	AFW94339.1	ANA_C13741	ANA_C11565	Hypothetical protein.	Copper-binding protein.	0.490
AFW96715.1	AFW94339.1	ANA_C20264	ANA_C11565	Hypothetical protein.	Copper-binding protein.	0.602
AFW96715.1	AFW96224.1	ANA_C20264	ANA_C13562	Hypothetical protein.	HlyD family secretion protein.	0.408
AFW97013.1	AFW94339.1	ANA_C20582	ANA_C11565	Hypothetical protein.	Copper-binding protein.	0.438
map-2	AFW94339.1	ANA_C11564	ANA_C11565	Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	Copper-binding protein.	0.466