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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW94460.1Amino acid ABC transporter permease protein. (308 aa)    
Predicted Functional Partners:
AFW94466.1
Polar amino acid ABC transporter ATP-binding protein.
 
 0.987
AFW94459.1
Periplasmic solute-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.982
AFW94465.1
Polar amino acid ABC transporter permease protein.
 
 
0.958
AFW96748.1
Polar amino acid ABC transporter inner membrane subunit.
 
 
0.831
AFW94816.1
Solute-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.762
AFW95653.1
Extracellular solute-binding protein, family 3.
 
  
 0.729
AFW96434.1
Periplasmic transport calcium-binding protein.
 
  
 0.505
phnD
Phosphonate-binding periplasmic protein.
  
  
  0.435
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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