Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFW94467.1Hypothetical protein. (658 aa)    
Predicted Functional Partners:
AFW92832.1
Type II restriction enzyme and modification methylase.
 
     0.570
AFW94222.1
Putative restriction enzyme and N6 adenine-specific DNA methyltransferase.
 
     0.569
AFW95903.1
Putative site-specific DNA methyltransferase.
 
     0.566
AFW95569.1
Type II restriction-modification enzyme.
 
     0.563
AFW96070.1
Hypothetical protein.
  
     0.539
AFW94062.1
Putative restriction enzyme and modification methylase.
 
     0.455
gltS
Glutamate synthase.
     
 0.440
AFW96709.1
IS607 family transposase.
  
     0.429
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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