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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW94664.1PIN domain-containing protein. (138 aa)    
Predicted Functional Partners:
AFW94665.1
Zinc finger SWIM domain-containing protein.
       0.773
AFW94666.1
Hypothetical protein.
       0.773
AFW94667.1
SNF2 family helicase.
       0.773
AFW96070.1
Hypothetical protein.
  
     0.628
AFW94668.1
Hypothetical protein.
       0.572
AFW94990.1
Virulence associated protein B.
  
 
 0.520
AFW94362.1
Hypothetical protein.
  
     0.495
AFW93422.1
Alcohol acetyltransferase.
  
     0.453
AFW96627.1
Peptidoglycan binding domain-containing protein.
  
     0.432
AFW95004.1
PIN domain-containing protein.
  
     0.407
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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