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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW94891.1Cell wall hydrolase/autolysin. (332 aa)    
Predicted Functional Partners:
AFW92952.1
Hypothetical protein.
  
     0.712
AFW95160.1
Hypothetical protein.
 
     0.620
AFW95118.1
Peptidase M23B.
 
   
 0.580
AFW95098.1
Peptidoglycan binding domain-containing protein.
  
     0.573
sepJ
Cell adhesion protein.
 
  
 0.558
bchH
Magnesium chelatase subunit H.
  
    0.518
AFW96869.1
Hypothetical protein.
  
     0.508
AFW96749.1
Glycoside hydrolase family 3 protein.
     
 0.507
AFW94575.1
LD-carboxypeptidase.
     
 0.505
AFW94337.1
Putative peptidoglycan-binding domain-containing protein.
  
     0.492
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.