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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW95017.1Trimeric LpxA-like enzyme. (238 aa)    
Predicted Functional Partners:
AFW93172.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.743
AFW95368.1
Acyltransferase-like protein.
  
     0.713
AFW96586.1
Multi-sensor hybrid histidine kinase.
 
  
 0.533
AFW92846.1
Exopolysaccharide biosynthesis protein.
 
  
 0.501
AFW94293.1
Modular nonribosomal peptide synthetase.
  
  
 0.468
mcyG
Peptide synthetase polyketide synthase fusion protein McyG.
  
  
 0.458
AFW95016.1
Microcompartments protein.
       0.452
AFW95015.1
Pentapeptide repeat-containing protein.
       0.446
AFW93174.1
Exopolysaccharide synthesis protein.
  
  
 0.432
AFW94449.1
Hypothetical protein.
  
  
 0.432
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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