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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW95050.1Lipase, class 2. (200 aa)    
Predicted Functional Partners:
AFW93660.1
Lipase.
     
 0.907
dgkA
Diacylglycerol kinase.
     
 0.904
AFW94645.1
Glycosyl transferase.
     
  0.900
AFW96802.1
AMP-dependent synthetase and ligase.
     
 0.834
AFW95742.1
AMP-dependent synthetase/ligase.
     
  0.800
AFW93585.1
GDSL-like lipase.
  
   
 0.550
AFW94398.1
Phospholipid/glycerol acyltransferase.
 
     0.492
rpmA
50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
   
   0.486
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
   0.483
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
    
   0.483
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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