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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFW95186.1Carotene isomerase. (501 aa)    
Predicted Functional Partners:
AFW94694.1
Carotene 7,8-desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
 
  
 0.966
AFW94256.1
Putative oxidoreductase.
 
 
 0.946
AFW93526.1
Putative dehydrogenase.
  
 
 0.929
crtB-2
Phytoene synthase.
 
  
 0.798
crtP
Phytoene desaturase.
 
   
 0.701
AFW95500.1
Magnesium chelatase ATPase subunit; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
  
 0.681
AFW97070.1
Metallophosphoesterase.
  
     0.677
chlG
Chlorophyll synthase.
 
  
 0.642
chlP
Geranylgeranyl reductase.
 
  
 0.628
crtB
Phytoene synthase.
  
  
 0.596
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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