Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gvpA6Gas vesicle protein GvpA. (71 aa)    
Predicted Functional Partners:
gvpA7
Gas vesicle protein GvpA.
 
 
  
0.901
gvpA5
Gas vesicle protein GvpA.
 
 
  
0.900
gvpA4
Gas vesicle protein GvpA.
 
 
  
0.868
gvpA3
Gas vesicle protein GvpA.
 
 
  
0.849
gvpA2
Gas vesicle protein GvpA.
 
 
  
0.838
gvpA1
Gas vesicle protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
 
  
0.831
gvpJ
Gas vesicle protein GvpJ; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
 0.786
gvpN
Gas vesicle protein GvpN.
 
   
 0.762
gvpF
Gas vesicle synthesis protein GvpL/GvpF.
 
   
 0.726
gvpK
Gas vesicle protein GvpK.
 
   
 0.687
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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