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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gvpCGas vesicle protein GvpC. (193 aa)    
Predicted Functional Partners:
gvpN
Gas vesicle protein GvpN.
     
 0.848
gvpA1
Gas vesicle protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
     
 0.825
gvpJ
Gas vesicle protein GvpJ; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
      
 0.753
gvpK
Gas vesicle protein GvpK.
      
 0.753
gvpF
Gas vesicle synthesis protein GvpL/GvpF.
      
 0.742
gvpV
Gas vesicle protein.
      
 0.714
gvpW
Gas vesicle protein GvpW.
      
 0.710
capD
Polysaccharide biosynthesis protein CapD.
      
 0.467
trkH
Potassium uptake protein TrkH.
      
 0.463
gvpA7
Gas vesicle protein GvpA.
       0.449
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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