Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gvpNGas vesicle protein GvpN. (335 aa)    
Predicted Functional Partners:
gvpK
Gas vesicle protein GvpK.
 
   
 0.976
gvpF
Gas vesicle synthesis protein GvpL/GvpF.
 
   
 0.975
gvpJ
Gas vesicle protein GvpJ; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
 0.970
gvpW
Gas vesicle protein GvpW.
  
   
 0.958
gvpA1
Gas vesicle protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
 0.953
gvpC
Gas vesicle protein GvpC.
     
 0.930
gvpA2
Gas vesicle protein GvpA.
 
   
 0.879
gvpV
Gas vesicle protein.
      
 0.838
gvpA7
Gas vesicle protein GvpA.
 
   
 0.778
gvpA6
Gas vesicle protein GvpA.
 
   
 0.762
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
Server load: low (20%) [HD]