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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcDGlycolate oxidase subunit GlcD. (489 aa)    
Predicted Functional Partners:
AFW95441.1
Fe-S binding subunit-containing protein.
 
 0.989
AFW95440.1
FAD binding domain-containing protein.
 
  
 
0.971
eda
2-dehydro-3-deoxyphosphogluconate/4-hydroxy-2- oxoglutarate aldolase.
   
 
 0.916
AFW93332.1
Aminotransferase.
  
 
 0.908
AFW95587.1
Haloacid dehalogenase-like hydrolase.
    
 0.905
AFW96638.1
HAD-superfamily hydrolase, subfamily IA, variant 1.
    
 0.905
hoxF
Hydrogenase subunit HoxF.
   
   0.738
ndhD4
NAD(P)H-quinone oxidoreductase subunit D4.
      
 0.670
ndhL
NADH dehydrogenase subunit NdhL.
      
 0.666
atpB
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
     
 0.618
Your Current Organism:
Anabaena sp. 90
NCBI taxonomy Id: 46234
Other names: A. sp. 90, Anabaena circinalis 90, Anabaena sp. strain 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.